Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXD4L1Q9NU39 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 AC068472.1-201ENST00000474589 881 ntBASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 AC020910.4-201ENST00000612269 540 ntBASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD4L1Q9NU39 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 AL353692.3-201ENST00000407031 1396 ntBASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 KRT18P22-201ENST00000402024 1347 ntBASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 RFESDP1-201ENST00000422350 461 ntBASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 HLA-F-220ENST00000434407 884 ntBASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 AC016597.2-201ENST00000613256 341 ntBASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 AC092364.2-201ENST00000596710 2692 ntBASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD4L1Q9NU39 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 IGHGP-201ENST00000390555 1178 ntBASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 AP003733.1-201ENST00000491725 852 ntBASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms