Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 SLC25A1P1-201ENST00000528351 927 ntBASIC18.12■□□□□ 0.49
CISHQ9NSE2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 AC034105.1-201ENST00000563488 319 ntBASIC18.12■□□□□ 0.49
CISHQ9NSE2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CISHQ9NSE2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
CISHQ9NSE2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 AC129492.6-201ENST00000611383 1305 ntBASIC18.11■□□□□ 0.49
CISHQ9NSE2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.11■□□□□ 0.49
CISHQ9NSE2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 RNF216P1-203ENST00000404404 2427 ntBASIC18.11■□□□□ 0.49
CISHQ9NSE2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CISHQ9NSE2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CISHQ9NSE2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CISHQ9NSE2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.1■□□□□ 0.49
CISHQ9NSE2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CISHQ9NSE2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CISHQ9NSE2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CISHQ9NSE2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CISHQ9NSE2 VN2R19P-201ENST00000442399 1052 ntBASIC18.1■□□□□ 0.49
CISHQ9NSE2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.1■□□□□ 0.49
CISHQ9NSE2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms