Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 AL671277.2-201ENST00000458060 996 ntBASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 VENTXP7-201ENST00000475503 772 ntBASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 AC063952.2-201ENST00000498792 1227 ntBASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 AL162727.3-201ENST00000635661 2787 ntBASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC42SE2Q9NRR3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 PCDHA1-201ENST00000378133 2726 ntBASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 KRT8P26-201ENST00000534154 1276 ntBASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 AC011467.2-201ENST00000598425 242 ntBASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE2Q9NRR3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms