Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AL390719.2-201ENST00000606993 987 ntBASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHB16Q9NRJ7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 AC117947.1-201ENST00000427448 529 ntBASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 RN7SL850P-201ENST00000579959 291 ntBASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB16Q9NRJ7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 LINC02012-201ENST00000608206 1725 ntBASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 AC093525.9-201ENST00000624961 1746 ntBASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 AC112907.2-201ENST00000448639 330 ntBASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 AC122714.2-201ENST00000502787 707 ntBASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB16Q9NRJ7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms