Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRMS1Q9HCU9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.68■□□□□ 0.74
BRMS1Q9HCU9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRMS1Q9HCU9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRMS1Q9HCU9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
BRMS1Q9HCU9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRMS1Q9HCU9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.68■□□□□ 0.74
BRMS1Q9HCU9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 FAM197Y8-203ENST00000450145 560 ntBASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 AC022211.2-201ENST00000585075 2527 ntBASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.67■□□□□ 0.74
BRMS1Q9HCU9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 AC092068.3-201ENST00000587894 2016 ntBASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 NFIC-211ENST00000641145 8399 ntBASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 RNPS1P1-201ENST00000507437 918 ntBASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 TUBB8P12-201ENST00000308911 1335 ntBASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 TUBB7P-202ENST00000428444 1305 ntBASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 TUBB8P7-204ENST00000567960 1332 ntBASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 AC243591.1-201ENST00000452967 1364 ntBASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BRMS1Q9HCU9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 RPS2P28-201ENST00000314255 741 ntBASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 AP002414.1-201ENST00000391405 1147 ntBASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 RPS2P1-201ENST00000434010 821 ntBASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 TP73-AS1-207ENST00000624167 988 ntBASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 AL021920.2-201ENST00000624828 1351 ntBASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRMS1Q9HCU9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BRMS1Q9HCU9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BRMS1Q9HCU9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BRMS1Q9HCU9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRMS1Q9HCU9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.64■□□□□ 0.74
BRMS1Q9HCU9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms