Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 AC006277.1-201ENST00000624348 1610 ntBASIC17.03■□□□□ 0.32
MRM3Q9HC36 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 TNRC18P3-201ENST00000441896 2691 ntBASIC17.02■□□□□ 0.32
MRM3Q9HC36 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 AC026396.1-201ENST00000419388 421 ntBASIC17.02■□□□□ 0.32
MRM3Q9HC36 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 AC021087.4-201ENST00000563761 564 ntBASIC17.02■□□□□ 0.32
MRM3Q9HC36 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 AC006557.2-201ENST00000592985 1240 ntBASIC17.02■□□□□ 0.32
MRM3Q9HC36 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 AL805961.1-202ENST00000641562 540 ntBASIC17.02■□□□□ 0.32
MRM3Q9HC36 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MRM3Q9HC36 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MRM3Q9HC36 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MRM3Q9HC36 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.02■□□□□ 0.31
MRM3Q9HC36 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRM3Q9HC36 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRM3Q9HC36 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRM3Q9HC36 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRM3Q9HC36 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRM3Q9HC36 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.02■□□□□ 0.31
MRM3Q9HC36 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.01■□□□□ 0.31
MRM3Q9HC36 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 IFNL4P1-201ENST00000607083 540 ntBASIC17.01■□□□□ 0.31
MRM3Q9HC36 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 AC107918.4-202ENST00000641623 219 ntBASIC17.01■□□□□ 0.31
MRM3Q9HC36 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 AC006538.1-201ENST00000567905 1585 ntBASIC17.01■□□□□ 0.31
MRM3Q9HC36 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRM3Q9HC36 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MRM3Q9HC36 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRM3Q9HC36 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
MRM3Q9HC36 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17■□□□□ 0.31
MRM3Q9HC36 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17■□□□□ 0.31
MRM3Q9HC36 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MRM3Q9HC36 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
MRM3Q9HC36 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MRM3Q9HC36 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17■□□□□ 0.31
MRM3Q9HC36 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17■□□□□ 0.31
MRM3Q9HC36 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
MRM3Q9HC36 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17■□□□□ 0.31
MRM3Q9HC36 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MRM3Q9HC36 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms