Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
KRTAP4-1Q9BYQ7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-1Q9BYQ7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-1Q9BYQ7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-1Q9BYQ7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-1Q9BYQ7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-1Q9BYQ7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-1Q9BYQ7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-1Q9BYQ7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
KRTAP4-1Q9BYQ7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 IGHV3-71-201ENST00000523324 359 ntBASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC132938.2-201ENST00000579188 680 ntBASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC027307.3-201ENST00000594262 1100 ntBASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 RN7SL828P-201ENST00000607615 303 ntBASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 AL591163.1-201ENST00000641757 987 ntBASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 KRT8P49-201ENST00000604166 1432 ntBASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 CU639417.3-201ENST00000624240 1404 ntBASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC8.71□□□□□ -1.02
KRTAP4-1Q9BYQ7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 GOLGA2P9-201ENST00000596977 1937 ntBASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-1Q9BYQ7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms