Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDNQ99608 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDNQ99608 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDNQ99608 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDNQ99608 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDNQ99608 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDNQ99608 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDNQ99608 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.14■□□□□ 0.33
NDNQ99608 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDNQ99608 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.14■□□□□ 0.33
NDNQ99608 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.14■□□□□ 0.33
NDNQ99608 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDNQ99608 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NDNQ99608 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.14■□□□□ 0.33
NDNQ99608 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.13■□□□□ 0.33
NDNQ99608 LINC02199-201ENST00000506655 2702 ntBASIC17.13■□□□□ 0.33
NDNQ99608 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NDNQ99608 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NDNQ99608 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.13■□□□□ 0.33
NDNQ99608 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.13■□□□□ 0.33
NDNQ99608 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
NDNQ99608 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NDNQ99608 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
NDNQ99608 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NDNQ99608 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.13■□□□□ 0.33
NDNQ99608 POM121L3P-201ENST00000419331 1163 ntBASIC17.13■□□□□ 0.33
NDNQ99608 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.13■□□□□ 0.33
NDNQ99608 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.13■□□□□ 0.33
NDNQ99608 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 AP000867.4-201ENST00000641616 219 ntBASIC17.13■□□□□ 0.33
NDNQ99608 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.13■□□□□ 0.33
NDNQ99608 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NDNQ99608 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.13■□□□□ 0.33
NDNQ99608 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.13■□□□□ 0.33
NDNQ99608 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NDNQ99608 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.13■□□□□ 0.33
NDNQ99608 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDNQ99608 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NDNQ99608 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
NDNQ99608 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.12■□□□□ 0.33
NDNQ99608 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.12■□□□□ 0.33
NDNQ99608 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.12■□□□□ 0.33
NDNQ99608 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.12■□□□□ 0.33
NDNQ99608 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.12■□□□□ 0.33
NDNQ99608 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.12■□□□□ 0.33
NDNQ99608 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.12■□□□□ 0.33
NDNQ99608 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NDNQ99608 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NDNQ99608 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NDNQ99608 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.12■□□□□ 0.33
NDNQ99608 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NDNQ99608 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDNQ99608 PCDHA14-201ENST00000506751 2298 ntBASIC17.12■□□□□ 0.33
NDNQ99608 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDNQ99608 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.11■□□□□ 0.33
NDNQ99608 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.11■□□□□ 0.33
NDNQ99608 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDNQ99608 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NDNQ99608 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NDNQ99608 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
NDNQ99608 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms