Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.74■□□□□ 0.75
CCDC17Q96LX7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 KRT8P23-201ENST00000560090 1207 ntBASIC19.74■□□□□ 0.75
CCDC17Q96LX7 AC025678.2-201ENST00000562061 970 ntBASIC19.74■□□□□ 0.75
CCDC17Q96LX7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 AC093028.1-201ENST00000622998 982 ntBASIC19.74■□□□□ 0.75
CCDC17Q96LX7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC17Q96LX7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.73■□□□□ 0.75
CCDC17Q96LX7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 SPCS2P4-201ENST00000436160 681 ntBASIC19.73■□□□□ 0.75
CCDC17Q96LX7 HMGN1P19-201ENST00000436976 333 ntBASIC19.73■□□□□ 0.75
CCDC17Q96LX7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 LINC01225-203ENST00000563550 1244 ntBASIC19.73■□□□□ 0.75
CCDC17Q96LX7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 AC021097.1-201ENST00000607902 574 ntBASIC19.73■□□□□ 0.75
CCDC17Q96LX7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 LINC00628-201ENST00000628516 1289 ntBASIC19.73■□□□□ 0.75
CCDC17Q96LX7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC17Q96LX7 PP12613-201ENST00000424958 2230 ntBASIC19.72■□□□□ 0.75
CCDC17Q96LX7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 AC069335.1-201ENST00000489972 472 ntBASIC19.72■□□□□ 0.75
CCDC17Q96LX7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 AC084121.4-201ENST00000641598 221 ntBASIC19.72■□□□□ 0.75
CCDC17Q96LX7 AF228730.8-201ENST00000642140 221 ntBASIC19.72■□□□□ 0.75
CCDC17Q96LX7 AC092053.1-201ENST00000605787 1936 ntBASIC19.72■□□□□ 0.75
CCDC17Q96LX7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC17Q96LX7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms