Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf72Q96LT7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf72Q96LT7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
C9orf72Q96LT7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.58■□□□□ 0.4
C9orf72Q96LT7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf72Q96LT7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 AL049757.1-201ENST00000616842 1596 ntBASIC17.57■□□□□ 0.4
C9orf72Q96LT7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 RN7SL606P-201ENST00000472779 293 ntBASIC17.57■□□□□ 0.4
C9orf72Q96LT7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 AC111152.3-201ENST00000569699 673 ntBASIC17.57■□□□□ 0.4
C9orf72Q96LT7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 AC124864.1-201ENST00000623408 392 ntBASIC17.57■□□□□ 0.4
C9orf72Q96LT7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 AC026691.1-201ENST00000602502 2017 ntBASIC17.57■□□□□ 0.4
C9orf72Q96LT7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf72Q96LT7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 AL162727.3-201ENST00000635661 2787 ntBASIC17.56■□□□□ 0.4
C9orf72Q96LT7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf72Q96LT7 KRT8P10-201ENST00000450021 1447 ntBASIC17.55■□□□□ 0.4
C9orf72Q96LT7 PCDHB17P-201ENST00000539533 2393 ntBASIC17.55■□□□□ 0.4
C9orf72Q96LT7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 AC233702.3-201ENST00000578656 1387 ntBASIC17.55■□□□□ 0.4
C9orf72Q96LT7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 AL391005.1-201ENST00000623953 2435 ntBASIC17.55■□□□□ 0.4
C9orf72Q96LT7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 AC026396.1-201ENST00000419388 421 ntBASIC17.55■□□□□ 0.4
C9orf72Q96LT7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 AC104819.1-201ENST00000504587 486 ntBASIC17.55■□□□□ 0.4
C9orf72Q96LT7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.55■□□□□ 0.4
C9orf72Q96LT7 Z69720.1-201ENST00000601483 472 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms