Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2E2Q96LR5 FLJ16779-201ENST00000612722 7638 ntBASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 MCCD1P2-201ENST00000423228 335 ntBASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 AC018845.2-201ENST00000568326 409 ntBASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 MIR3687-2-201ENST00000577708 61 ntBASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 MIR3687-1-201ENST00000614492 61 ntBASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 AC004877.2-201ENST00000623941 599 ntBASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2E2Q96LR5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 BCAR1-209ENST00000546196 1340 ntBASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 YBX2P1-201ENST00000394192 760 ntBASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 AC023274.1-201ENST00000418278 595 ntBASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 AL513480.1-201ENST00000451731 511 ntBASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 PDPK2P-202ENST00000562415 1191 ntBASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 REXO1L3P-201ENST00000622202 1288 ntBASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 AL645728.2-201ENST00000641974 660 ntBASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 TOP3BP1-201ENST00000420768 1380 ntBASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2E2Q96LR5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2E2Q96LR5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2E2Q96LR5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2E2Q96LR5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
UBE2E2Q96LR5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms