Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 AC067863.1-201ENST00000494933 530 ntBASIC19.9■□□□□ 0.78
TRIM47Q96LD4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.9■□□□□ 0.78
TRIM47Q96LD4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 AC012645.4-201ENST00000610691 1061 ntBASIC19.9■□□□□ 0.78
TRIM47Q96LD4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM47Q96LD4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRIM47Q96LD4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.89■□□□□ 0.78
TRIM47Q96LD4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.78
TRIM47Q96LD4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 FAM185BP-201ENST00000443595 716 ntBASIC19.89■□□□□ 0.77
TRIM47Q96LD4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 TIMM8BP1-201ENST00000452384 211 ntBASIC19.89■□□□□ 0.77
TRIM47Q96LD4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRIM47Q96LD4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 AC009336.1-201ENST00000608941 1553 ntBASIC19.88■□□□□ 0.77
TRIM47Q96LD4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 GK-202ENST00000378941 458 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 AC112191.1-201ENST00000523689 701 ntBASIC19.88■□□□□ 0.77
TRIM47Q96LD4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM47Q96LD4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms