Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.03■□□□□ 0.48
CALR3Q96L12 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.03■□□□□ 0.48
CALR3Q96L12 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 AC022188.1-201ENST00000620960 1664 ntBASIC18.03■□□□□ 0.48
CALR3Q96L12 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CALR3Q96L12 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.03■□□□□ 0.48
CALR3Q96L12 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.03■□□□□ 0.48
CALR3Q96L12 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CALR3Q96L12 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.03■□□□□ 0.48
CALR3Q96L12 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CALR3Q96L12 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.03■□□□□ 0.48
CALR3Q96L12 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CALR3Q96L12 SPDYE21P-201ENST00000413323 827 ntBASIC18.03■□□□□ 0.48
CALR3Q96L12 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.03■□□□□ 0.48
CALR3Q96L12 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 MINOS1P3-201ENST00000457048 203 ntBASIC18.03■□□□□ 0.48
CALR3Q96L12 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 DUX4L17-201ENST00000557360 1267 ntBASIC18.03■□□□□ 0.48
CALR3Q96L12 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CALR3Q96L12 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CALR3Q96L12 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CALR3Q96L12 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.03■□□□□ 0.48
CALR3Q96L12 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.03■□□□□ 0.48
CALR3Q96L12 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALR3Q96L12 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CALR3Q96L12 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 AL645728.1-201ENST00000366221 2101 ntBASIC18.02■□□□□ 0.48
CALR3Q96L12 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CALR3Q96L12 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.02■□□□□ 0.48
CALR3Q96L12 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.02■□□□□ 0.48
CALR3Q96L12 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CALR3Q96L12 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CALR3Q96L12 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CALR3Q96L12 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 AL031133.1-201ENST00000406807 723 ntBASIC18.02■□□□□ 0.48
CALR3Q96L12 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 AC091607.1-201ENST00000490318 1060 ntBASIC18.02■□□□□ 0.48
CALR3Q96L12 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.02■□□□□ 0.48
CALR3Q96L12 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.02■□□□□ 0.48
CALR3Q96L12 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 AC073592.4-201ENST00000623827 446 ntBASIC18.02■□□□□ 0.48
CALR3Q96L12 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALR3Q96L12 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CALR3Q96L12 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.02■□□□□ 0.47
CALR3Q96L12 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.02■□□□□ 0.47
CALR3Q96L12 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CALR3Q96L12 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CALR3Q96L12 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CALR3Q96L12 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CALR3Q96L12 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CALR3Q96L12 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.02■□□□□ 0.47
CALR3Q96L12 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CALR3Q96L12 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CALR3Q96L12 KRT18P1-202ENST00000452408 1331 ntBASIC18.01■□□□□ 0.47
CALR3Q96L12 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CALR3Q96L12 AL391256.1-201ENST00000443260 1855 ntBASIC18.01■□□□□ 0.47
CALR3Q96L12 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CALR3Q96L12 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.01■□□□□ 0.47
CALR3Q96L12 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CALR3Q96L12 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.01■□□□□ 0.47
CALR3Q96L12 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CALR3Q96L12 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CALR3Q96L12 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CALR3Q96L12 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.01■□□□□ 0.47
CALR3Q96L12 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.01■□□□□ 0.47
CALR3Q96L12 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.01■□□□□ 0.47
CALR3Q96L12 NUS1P1-201ENST00000446295 882 ntBASIC18.01■□□□□ 0.47
CALR3Q96L12 TSSC2-201ENST00000450217 709 ntBASIC18.01■□□□□ 0.47
CALR3Q96L12 KRT17P6-201ENST00000453795 1220 ntBASIC18.01■□□□□ 0.47
CALR3Q96L12 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.01■□□□□ 0.47
CALR3Q96L12 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.01■□□□□ 0.47
CALR3Q96L12 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CALR3Q96L12 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms