Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 EGFEM1P-202ENST00000431685 1563 ntBASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.42□□□□□ -0.42
CHCHD1Q96BP2 AC010491.1-201ENST00000563101 2797 ntBASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 AL161772.1-201ENST00000610494 4412 ntBASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 NIFKP9-201ENST00000419265 221 ntBASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 AC002558.1-201ENST00000488906 803 ntBASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.41□□□□□ -0.42
CHCHD1Q96BP2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 TUBB8P12-201ENST00000308911 1335 ntBASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 TUBB7P-202ENST00000428444 1305 ntBASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 TUBB8P7-204ENST00000567960 1332 ntBASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 MIPEPP3-201ENST00000412105 444 ntBASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 AC026271.3-201ENST00000571884 352 ntBASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CHCHD1Q96BP2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms