Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 AL162430.1-201ENST00000480705 870 ntBASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 AP002490.2-201ENST00000524791 560 ntBASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 AC073195.1-201ENST00000607241 877 ntBASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 AC133041.1-202ENST00000642053 222 ntBASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM11BQ8TCY0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 NCF1B-203ENST00000435988 1254 ntBASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM11BQ8TCY0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms