Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 AC108073.2-201ENST00000464002 357 ntBASIC18.18■□□□□ 0.5
LMO3Q8TAP4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 AC116407.3-201ENST00000623905 1129 ntBASIC18.18■□□□□ 0.5
LMO3Q8TAP4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 AL671710.1-201ENST00000610245 2349 ntBASIC18.18■□□□□ 0.5
LMO3Q8TAP4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMO3Q8TAP4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 HLA-J-202ENST00000469281 1241 ntBASIC18.17■□□□□ 0.5
LMO3Q8TAP4 AC092910.1-201ENST00000482027 1129 ntBASIC18.17■□□□□ 0.5
LMO3Q8TAP4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 AC091167.2-201ENST00000579581 588 ntBASIC18.17■□□□□ 0.5
LMO3Q8TAP4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 AC004790.2-201ENST00000623588 572 ntBASIC18.17■□□□□ 0.5
LMO3Q8TAP4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.17■□□□□ 0.5
LMO3Q8TAP4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 HLA-A-201ENST00000376802 1334 ntBASIC18.17■□□□□ 0.5
LMO3Q8TAP4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LMO3Q8TAP4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 AC131009.4-201ENST00000624048 1740 ntBASIC18.16■□□□□ 0.5
LMO3Q8TAP4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 IGHV3-22-201ENST00000520721 359 ntBASIC18.16■□□□□ 0.5
LMO3Q8TAP4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms