Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 AC106886.4-201ENST00000623557 2502 ntBASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 UPF3AP3-201ENST00000420996 769 ntBASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 AC107918.4-202ENST00000641623 219 ntBASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FBXO39Q8N4B4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 MIR3687-2-201ENST00000577708 61 ntBASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 MIR3687-1-201ENST00000614492 61 ntBASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.03■□□□□ 0.32
FBXO39Q8N4B4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 UNC93B6-202ENST00000528242 690 ntBASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 AC040169.1-201ENST00000565382 521 ntBASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 STK25P1-201ENST00000585406 838 ntBASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 AC010327.4-202ENST00000591484 748 ntBASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 AC055717.3-201ENST00000622967 595 ntBASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 AP000867.4-201ENST00000641616 219 ntBASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FBXO39Q8N4B4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms