Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 SPCS2P4-201ENST00000436160 681 ntBASIC26.35■■□□□ 1.81
VPS8Q8N3P4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 KRT8P39-201ENST00000396270 1433 ntBASIC26.35■■□□□ 1.81
VPS8Q8N3P4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC26.35■■□□□ 1.81
VPS8Q8N3P4 AL603756.1-201ENST00000606511 2163 ntBASIC26.35■■□□□ 1.81
VPS8Q8N3P4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 AC023141.5-201ENST00000458585 616 ntBASIC26.34■■□□□ 1.81
VPS8Q8N3P4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 AR-207ENST00000612010 3896 ntTSL 5 BASIC26.34■■□□□ 1.81
VPS8Q8N3P4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 SPDYE11-202ENST00000450699 704 ntBASIC26.33■■□□□ 1.81
VPS8Q8N3P4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 FAM86C2P-203ENST00000528684 1004 ntBASIC26.33■■□□□ 1.81
VPS8Q8N3P4 SPDYE9P-201ENST00000570642 692 ntBASIC26.33■■□□□ 1.81
VPS8Q8N3P4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 SPDYE10P-202ENST00000612005 668 ntBASIC26.33■■□□□ 1.81
VPS8Q8N3P4 SPDYE8P-202ENST00000612377 668 ntBASIC26.33■■□□□ 1.81
VPS8Q8N3P4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 GGT4P-201ENST00000623672 1708 ntBASIC26.33■■□□□ 1.81
VPS8Q8N3P4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
VPS8Q8N3P4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.8
VPS8Q8N3P4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
VPS8Q8N3P4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 AC084121.4-201ENST00000641598 221 ntBASIC26.32■■□□□ 1.8
VPS8Q8N3P4 AF228730.8-201ENST00000642140 221 ntBASIC26.32■■□□□ 1.8
VPS8Q8N3P4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 AC080080.1-201ENST00000625121 2420 ntBASIC26.32■■□□□ 1.8
VPS8Q8N3P4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
VPS8Q8N3P4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms