Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SIX5Q8N196 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.39■□□□□ 0.37
SIX5Q8N196 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SIX5Q8N196 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.39■□□□□ 0.37
SIX5Q8N196 HMGA1P7-201ENST00000406908 502 ntBASIC17.39■□□□□ 0.37
SIX5Q8N196 KRT17P7-201ENST00000451704 1104 ntBASIC17.39■□□□□ 0.37
SIX5Q8N196 AC004890.2-204ENST00000481968 304 ntBASIC17.39■□□□□ 0.37
SIX5Q8N196 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.39■□□□□ 0.37
SIX5Q8N196 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.39■□□□□ 0.37
SIX5Q8N196 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.39■□□□□ 0.37
SIX5Q8N196 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.39■□□□□ 0.37
SIX5Q8N196 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.39■□□□□ 0.37
SIX5Q8N196 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 AC084121.4-201ENST00000641598 221 ntBASIC17.39■□□□□ 0.37
SIX5Q8N196 AF228730.8-201ENST00000642140 221 ntBASIC17.39■□□□□ 0.37
SIX5Q8N196 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SIX5Q8N196 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.39■□□□□ 0.37
SIX5Q8N196 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SIX5Q8N196 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SIX5Q8N196 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.39■□□□□ 0.37
SIX5Q8N196 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SIX5Q8N196 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.39■□□□□ 0.37
SIX5Q8N196 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SIX5Q8N196 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SIX5Q8N196 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.38■□□□□ 0.37
SIX5Q8N196 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.38■□□□□ 0.37
SIX5Q8N196 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SIX5Q8N196 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.38■□□□□ 0.37
SIX5Q8N196 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.38■□□□□ 0.37
SIX5Q8N196 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.38■□□□□ 0.37
SIX5Q8N196 ATP5G2P4-201ENST00000442175 420 ntBASIC17.38■□□□□ 0.37
SIX5Q8N196 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.38■□□□□ 0.37
SIX5Q8N196 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.38■□□□□ 0.37
SIX5Q8N196 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.38■□□□□ 0.37
SIX5Q8N196 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SIX5Q8N196 AL009183.1-201ENST00000603760 355 ntBASIC17.38■□□□□ 0.37
SIX5Q8N196 AC004233.3-201ENST00000607794 1269 ntBASIC17.38■□□□□ 0.37
SIX5Q8N196 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.38■□□□□ 0.37
SIX5Q8N196 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.38■□□□□ 0.37
SIX5Q8N196 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.38■□□□□ 0.37
SIX5Q8N196 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIX5Q8N196 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.37■□□□□ 0.37
SIX5Q8N196 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.37■□□□□ 0.37
SIX5Q8N196 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.37■□□□□ 0.37
SIX5Q8N196 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SIX5Q8N196 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.37■□□□□ 0.37
SIX5Q8N196 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
SIX5Q8N196 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
SIX5Q8N196 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.37■□□□□ 0.37
SIX5Q8N196 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.37■□□□□ 0.37
SIX5Q8N196 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.37■□□□□ 0.37
SIX5Q8N196 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 MRPS18AP1-201ENST00000414458 589 ntBASIC17.37■□□□□ 0.37
SIX5Q8N196 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.37■□□□□ 0.37
SIX5Q8N196 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.37■□□□□ 0.37
SIX5Q8N196 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.37■□□□□ 0.37
SIX5Q8N196 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.37■□□□□ 0.37
SIX5Q8N196 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SIX5Q8N196 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SIX5Q8N196 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.37■□□□□ 0.37
SIX5Q8N196 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms