Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 AC087289.5-201ENST00000586076 3175 ntBASIC23.23■■□□□ 1.31
XRN1Q8IZH2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 DOC2GP-202ENST00000514950 1163 ntBASIC23.22■■□□□ 1.31
XRN1Q8IZH2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 5S_rRNA.22-201ENST00000614916 106 ntBASIC23.22■■□□□ 1.31
XRN1Q8IZH2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
XRN1Q8IZH2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 RAB43P1-201ENST00000561790 589 ntBASIC23.21■■□□□ 1.31
XRN1Q8IZH2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
XRN1Q8IZH2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
XRN1Q8IZH2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 RN7SL752P-201ENST00000463779 287 ntBASIC23.2■■□□□ 1.3
XRN1Q8IZH2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 AC008735.3-201ENST00000596646 500 ntBASIC23.2■■□□□ 1.3
XRN1Q8IZH2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC23.2■■□□□ 1.3
XRN1Q8IZH2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 ANKRD19P-201ENST00000338192 862 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AC087499.6-201ENST00000411576 835 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AC098850.1-201ENST00000419919 790 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 SLC25A6P5-201ENST00000435663 894 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AC022210.1-201ENST00000449856 793 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 ELK1P1-201ENST00000485699 580 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AC023310.3-201ENST00000557027 670 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AC100756.1-201ENST00000562736 682 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AC138749.3-201ENST00000567691 622 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AC116165.1-201ENST00000611806 668 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 RPSAP52-203ENST00000622976 1023 ntBASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms