Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 CEND1P1-201ENST00000451006 455 ntBASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 REXO1L3P-201ENST00000622202 1288 ntBASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 AC079781.4-201ENST00000641908 219 ntBASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 AC068137.2-201ENST00000605408 478 ntBASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 AL596442.2-201ENST00000610240 980 ntBASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 AC141586.5-201ENST00000624546 2050 ntBASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN4BQ8IWT1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 AC092919.2-201ENST00000623631 1645 ntBASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 CROCCP1-201ENST00000426910 5675 ntBASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 AC091812.2-201ENST00000619081 385 ntBASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN4BQ8IWT1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.89■□□□□ 0.46
SCN4BQ8IWT1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SCN4BQ8IWT1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.89■□□□□ 0.46
SCN4BQ8IWT1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SCN4BQ8IWT1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms