Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXR1Q6PIV2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 KRT8P3-201ENST00000519669 1449 ntBASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 TPSP2-201ENST00000561760 610 ntBASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 IGHV3-41-201ENST00000613121 348 ntBASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 RCC2P3-201ENST00000418112 1537 ntBASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXR1Q6PIV2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 MIR662-201ENST00000384847 95 ntBASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 AC104819.1-201ENST00000504587 486 ntBASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXR1Q6PIV2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 AP002414.2-201ENST00000591780 3365 ntBASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms