Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 AC145285.3-201ENST00000564603 959 ntBASIC17.67■□□□□ 0.42
TRNP1Q6NT89 MPDU1-223ENST00000582151 728 ntBASIC17.67■□□□□ 0.42
TRNP1Q6NT89 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 Z83851.2-201ENST00000609564 659 ntBASIC17.67■□□□□ 0.42
TRNP1Q6NT89 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 AC006277.1-201ENST00000624348 1610 ntBASIC17.67■□□□□ 0.42
TRNP1Q6NT89 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 HLA-A-202ENST00000376806 1854 ntBASIC17.67■□□□□ 0.42
TRNP1Q6NT89 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRNP1Q6NT89 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 AC104109.2-201ENST00000602919 1418 ntBASIC17.66■□□□□ 0.42
TRNP1Q6NT89 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 AC010654.1-201ENST00000615722 808 ntBASIC17.66■□□□□ 0.42
TRNP1Q6NT89 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 PCDHA14-201ENST00000506751 2298 ntBASIC17.66■□□□□ 0.42
TRNP1Q6NT89 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 AL671710.1-201ENST00000610245 2349 ntBASIC17.66■□□□□ 0.42
TRNP1Q6NT89 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.66■□□□□ 0.42
TRNP1Q6NT89 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 AL590627.1-203ENST00000421194 1026 ntBASIC17.65■□□□□ 0.42
TRNP1Q6NT89 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 PRSS29P-201ENST00000440800 595 ntBASIC17.65■□□□□ 0.42
TRNP1Q6NT89 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 HCG4B-203ENST00000450128 991 ntBASIC17.65■□□□□ 0.42
TRNP1Q6NT89 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 MIR4751-201ENST00000578027 74 ntBASIC17.65■□□□□ 0.42
TRNP1Q6NT89 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 AC013467.2-201ENST00000605472 835 ntBASIC17.65■□□□□ 0.42
TRNP1Q6NT89 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRNP1Q6NT89 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRNP1Q6NT89 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.64■□□□□ 0.42
TRNP1Q6NT89 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.64■□□□□ 0.42
TRNP1Q6NT89 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms