Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
VARS2Q5ST30 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VARS2Q5ST30 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.96■□□□□ 0.47
VARS2Q5ST30 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 AC093520.2-201ENST00000561830 333 ntBASIC17.96■□□□□ 0.47
VARS2Q5ST30 RARRES2P8-201ENST00000566335 367 ntBASIC17.96■□□□□ 0.47
VARS2Q5ST30 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
VARS2Q5ST30 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VARS2Q5ST30 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VARS2Q5ST30 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
VARS2Q5ST30 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 AL133373.2-201ENST00000623187 2828 ntBASIC17.96■□□□□ 0.47
VARS2Q5ST30 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VARS2Q5ST30 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.96■□□□□ 0.46
VARS2Q5ST30 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 AL627223.1-201ENST00000416693 442 ntBASIC17.95■□□□□ 0.46
VARS2Q5ST30 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 RN7SL589P-201ENST00000481268 310 ntBASIC17.95■□□□□ 0.46
VARS2Q5ST30 AC079140.1-201ENST00000508039 487 ntBASIC17.95■□□□□ 0.46
VARS2Q5ST30 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 SPCS2P1-201ENST00000561636 679 ntBASIC17.95■□□□□ 0.46
VARS2Q5ST30 AC004449.1-201ENST00000564240 433 ntBASIC17.95■□□□□ 0.46
VARS2Q5ST30 AL135744.1-201ENST00000565098 629 ntBASIC17.95■□□□□ 0.46
VARS2Q5ST30 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.95■□□□□ 0.46
VARS2Q5ST30 AL161645.1-201ENST00000622716 1255 ntBASIC17.95■□□□□ 0.46
VARS2Q5ST30 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARS2Q5ST30 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VARS2Q5ST30 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.94■□□□□ 0.46
VARS2Q5ST30 AC109635.5-201ENST00000533593 962 ntBASIC17.94■□□□□ 0.46
VARS2Q5ST30 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 AC087641.1-201ENST00000557561 1021 ntBASIC17.94■□□□□ 0.46
VARS2Q5ST30 AC243562.1-201ENST00000560672 389 ntBASIC17.94■□□□□ 0.46
VARS2Q5ST30 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 MPDU1-223ENST00000582151 728 ntBASIC17.94■□□□□ 0.46
VARS2Q5ST30 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms