Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.7■□□□□ 0.58
KCNA1Q09470 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KCNA1Q09470 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KCNA1Q09470 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.69■□□□□ 0.58
KCNA1Q09470 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.69■□□□□ 0.58
KCNA1Q09470 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
KCNA1Q09470 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KCNA1Q09470 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KCNA1Q09470 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.69■□□□□ 0.58
KCNA1Q09470 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.69■□□□□ 0.58
KCNA1Q09470 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
KCNA1Q09470 AC009947.1-201ENST00000444350 727 ntBASIC18.69■□□□□ 0.58
KCNA1Q09470 AC093909.1-201ENST00000504731 1122 ntBASIC18.69■□□□□ 0.58
KCNA1Q09470 SLC25A1P1-201ENST00000528351 927 ntBASIC18.69■□□□□ 0.58
KCNA1Q09470 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.69■□□□□ 0.58
KCNA1Q09470 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.69■□□□□ 0.58
KCNA1Q09470 REXO1L3P-201ENST00000622202 1288 ntBASIC18.69■□□□□ 0.58
KCNA1Q09470 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.69■□□□□ 0.58
KCNA1Q09470 AF228730.7-201ENST00000641842 219 ntBASIC18.69■□□□□ 0.58
KCNA1Q09470 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.69■□□□□ 0.58
KCNA1Q09470 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.69■□□□□ 0.58
KCNA1Q09470 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.69■□□□□ 0.58
KCNA1Q09470 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
KCNA1Q09470 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KCNA1Q09470 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 IL9RP2-201ENST00000423948 1312 ntBASIC18.69■□□□□ 0.58
KCNA1Q09470 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KCNA1Q09470 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.69■□□□□ 0.58
KCNA1Q09470 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA1Q09470 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.69■□□□□ 0.58
KCNA1Q09470 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNA1Q09470 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNA1Q09470 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNA1Q09470 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KCNA1Q09470 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
KCNA1Q09470 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.68■□□□□ 0.58
KCNA1Q09470 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNA1Q09470 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.68■□□□□ 0.58
KCNA1Q09470 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.68■□□□□ 0.58
KCNA1Q09470 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.68■□□□□ 0.58
KCNA1Q09470 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.68■□□□□ 0.58
KCNA1Q09470 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.68■□□□□ 0.58
KCNA1Q09470 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KCNA1Q09470 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.68■□□□□ 0.58
KCNA1Q09470 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
KCNA1Q09470 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.68■□□□□ 0.58
KCNA1Q09470 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KCNA1Q09470 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KCNA1Q09470 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNA1Q09470 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
KCNA1Q09470 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNA1Q09470 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNA1Q09470 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
KCNA1Q09470 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.67■□□□□ 0.58
KCNA1Q09470 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.67■□□□□ 0.58
KCNA1Q09470 AC108751.1-201ENST00000490852 363 ntBASIC18.67■□□□□ 0.58
KCNA1Q09470 AC107918.2-201ENST00000530817 355 ntBASIC18.67■□□□□ 0.58
KCNA1Q09470 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
KCNA1Q09470 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.67■□□□□ 0.58
KCNA1Q09470 PGM5P2-202ENST00000637225 1043 ntBASIC18.67■□□□□ 0.58
KCNA1Q09470 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNA1Q09470 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KCNA1Q09470 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNA1Q09470 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.67■□□□□ 0.58
KCNA1Q09470 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNA1Q09470 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
KCNA1Q09470 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNA1Q09470 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KCNA1Q09470 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNA1Q09470 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms