Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 AL353692.3-201ENST00000407031 1396 ntBASIC14.44□□□□□ -0.1
SSBP1Q04837 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 AL049757.1-201ENST00000616842 1596 ntBASIC14.43□□□□□ -0.1
SSBP1Q04837 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.43□□□□□ -0.1
SSBP1Q04837 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SSBP1Q04837 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.43□□□□□ -0.1
SSBP1Q04837 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.43□□□□□ -0.1
SSBP1Q04837 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.43□□□□□ -0.1
SSBP1Q04837 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.43□□□□□ -0.1
SSBP1Q04837 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.43□□□□□ -0.1
SSBP1Q04837 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SSBP1Q04837 AP000525.1-201ENST00000608286 694 ntBASIC14.43□□□□□ -0.1
SSBP1Q04837 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.43□□□□□ -0.1
SSBP1Q04837 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.43□□□□□ -0.1
SSBP1Q04837 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.43□□□□□ -0.1
SSBP1Q04837 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SSBP1Q04837 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.43□□□□□ -0.1
SSBP1Q04837 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 AL021920.2-201ENST00000624828 1351 ntBASIC14.43□□□□□ -0.1
SSBP1Q04837 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.43□□□□□ -0.1
SSBP1Q04837 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP1Q04837 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 AC006058.4-201ENST00000624016 1670 ntBASIC14.42□□□□□ -0.1
SSBP1Q04837 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP1Q04837 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP1Q04837 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SSBP1Q04837 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
SSBP1Q04837 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 AC007967.3-201ENST00000434308 558 ntBASIC14.42□□□□□ -0.1
SSBP1Q04837 HLA-F-220ENST00000434407 884 ntBASIC14.42□□□□□ -0.1
SSBP1Q04837 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SSBP1Q04837 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP1Q04837 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP1Q04837 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP1Q04837 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.42□□□□□ -0.1
SSBP1Q04837 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP1Q04837 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.42□□□□□ -0.1
SSBP1Q04837 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms