Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 AC068587.6-202ENST00000641839 5619 ntBASIC12.08□□□□□ -0.48
RPL39P62891 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.08□□□□□ -0.48
RPL39P62891 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.08□□□□□ -0.48
RPL39P62891 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.08□□□□□ -0.48
RPL39P62891 AC109462.3-201ENST00000573934 613 ntBASIC12.08□□□□□ -0.48
RPL39P62891 MIR4785-201ENST00000585005 73 ntBASIC12.08□□□□□ -0.48
RPL39P62891 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 AL136038.4-201ENST00000603606 1261 ntBASIC12.08□□□□□ -0.48
RPL39P62891 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.08□□□□□ -0.48
RPL39P62891 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
RPL39P62891 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
RPL39P62891 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.08□□□□□ -0.48
RPL39P62891 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
RPL39P62891 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.08□□□□□ -0.48
RPL39P62891 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.08□□□□□ -0.48
RPL39P62891 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 AL391256.1-201ENST00000443260 1855 ntBASIC12.08□□□□□ -0.48
RPL39P62891 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPL39P62891 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
RPL39P62891 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 AL365203.3-201ENST00000609742 2057 ntBASIC12.07□□□□□ -0.48
RPL39P62891 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 COX5BP2-201ENST00000392354 334 ntBASIC12.07□□□□□ -0.48
RPL39P62891 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.07□□□□□ -0.48
RPL39P62891 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.07□□□□□ -0.48
RPL39P62891 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.07□□□□□ -0.48
RPL39P62891 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 ECEL1P2-202ENST00000465689 757 ntBASIC12.07□□□□□ -0.48
RPL39P62891 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.07□□□□□ -0.48
RPL39P62891 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.07□□□□□ -0.48
RPL39P62891 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.07□□□□□ -0.48
RPL39P62891 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 GCSHP2-201ENST00000560971 527 ntBASIC12.07□□□□□ -0.48
RPL39P62891 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.07□□□□□ -0.48
RPL39P62891 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.07□□□□□ -0.48
RPL39P62891 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 AP002414.2-201ENST00000591780 3365 ntBASIC12.07□□□□□ -0.48
RPL39P62891 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RPL39P62891 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.07□□□□□ -0.48
RPL39P62891 FAM87A-204ENST00000613235 858 ntBASIC12.07□□□□□ -0.48
RPL39P62891 AC079602.3-201ENST00000623931 403 ntBASIC12.07□□□□□ -0.48
RPL39P62891 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms