Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 AL391256.1-201ENST00000443260 1855 ntBASIC14.86□□□□□ -0.03
CLDN12P56749 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.86□□□□□ -0.03
CLDN12P56749 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 AC103702.1-201ENST00000548801 2630 ntBASIC14.86□□□□□ -0.03
CLDN12P56749 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN12P56749 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN12P56749 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CLDN12P56749 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 AC092597.1-201ENST00000487352 616 ntBASIC14.86□□□□□ -0.03
CLDN12P56749 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 ZNF444P1-201ENST00000559497 298 ntBASIC14.86□□□□□ -0.03
CLDN12P56749 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN12P56749 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 AL138966.2-201ENST00000621997 464 ntBASIC14.86□□□□□ -0.03
CLDN12P56749 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CLDN12P56749 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLDN12P56749 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CLDN12P56749 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN12P56749 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN12P56749 LINC01568-207ENST00000641790 1380 ntBASIC14.85□□□□□ -0.03
CLDN12P56749 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN12P56749 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN12P56749 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN12P56749 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN12P56749 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLDN12P56749 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 AC007967.3-201ENST00000434308 558 ntBASIC14.85□□□□□ -0.03
CLDN12P56749 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.85□□□□□ -0.03
CLDN12P56749 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.85□□□□□ -0.03
CLDN12P56749 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN12P56749 AL441883.1-201ENST00000566170 1045 ntBASIC14.85□□□□□ -0.03
CLDN12P56749 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.85□□□□□ -0.03
CLDN12P56749 GPR32P1-201ENST00000601788 811 ntBASIC14.85□□□□□ -0.03
CLDN12P56749 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CLDN12P56749 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN12P56749 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN12P56749 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN12P56749 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN12P56749 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN12P56749 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms