Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX3P56589 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX3P56589 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.73■□□□□ 0.59
PEX3P56589 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PEX3P56589 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX3P56589 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PEX3P56589 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX3P56589 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX3P56589 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.73■□□□□ 0.59
PEX3P56589 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.72■□□□□ 0.59
PEX3P56589 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 AL021920.2-201ENST00000624828 1351 ntBASIC18.72■□□□□ 0.59
PEX3P56589 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.72■□□□□ 0.59
PEX3P56589 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PEX3P56589 FAM185BP-201ENST00000443595 716 ntBASIC18.72■□□□□ 0.59
PEX3P56589 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.72■□□□□ 0.59
PEX3P56589 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.72■□□□□ 0.59
PEX3P56589 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.72■□□□□ 0.59
PEX3P56589 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
PEX3P56589 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.72■□□□□ 0.59
PEX3P56589 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.72■□□□□ 0.59
PEX3P56589 ACTL9-202ENST00000612068 1252 ntBASIC18.72■□□□□ 0.59
PEX3P56589 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.72■□□□□ 0.59
PEX3P56589 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PEX3P56589 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
PEX3P56589 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PEX3P56589 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX3P56589 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PEX3P56589 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PEX3P56589 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PEX3P56589 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
PEX3P56589 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.71■□□□□ 0.59
PEX3P56589 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.71■□□□□ 0.59
PEX3P56589 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PEX3P56589 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.71■□□□□ 0.59
PEX3P56589 PGAM5P1-201ENST00000518923 814 ntBASIC18.71■□□□□ 0.59
PEX3P56589 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.71■□□□□ 0.59
PEX3P56589 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PEX3P56589 AC096734.2-201ENST00000562054 433 ntBASIC18.71■□□□□ 0.59
PEX3P56589 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PEX3P56589 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.71■□□□□ 0.59
PEX3P56589 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.71■□□□□ 0.59
PEX3P56589 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 PMS2P7-201ENST00000506558 1336 ntBASIC18.71■□□□□ 0.59
PEX3P56589 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.71■□□□□ 0.59
PEX3P56589 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX3P56589 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PEX3P56589 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PEX3P56589 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 TOP3BP1-201ENST00000420768 1380 ntBASIC18.7■□□□□ 0.58
PEX3P56589 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.7■□□□□ 0.58
PEX3P56589 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.7■□□□□ 0.58
PEX3P56589 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.7■□□□□ 0.58
PEX3P56589 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.7■□□□□ 0.58
PEX3P56589 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.7■□□□□ 0.58
PEX3P56589 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.7■□□□□ 0.58
PEX3P56589 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PEX3P56589 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.7■□□□□ 0.58
PEX3P56589 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.7■□□□□ 0.58
PEX3P56589 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.7■□□□□ 0.58
PEX3P56589 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX3P56589 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 729.2 ms