Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 AL020989.1-201ENST00000422979 469 ntBASIC16.69■□□□□ 0.26
CDH13P55290 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CDH13P55290 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH13P55290 SIGLEC30P-201ENST00000455569 941 ntBASIC16.69■□□□□ 0.26
CDH13P55290 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CDH13P55290 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH13P55290 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH13P55290 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH13P55290 AC114341.1-201ENST00000618070 349 ntBASIC16.69■□□□□ 0.26
CDH13P55290 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDH13P55290 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
CDH13P55290 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDH13P55290 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH13P55290 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH13P55290 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH13P55290 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH13P55290 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH13P55290 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH13P55290 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH13P55290 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH13P55290 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CDH13P55290 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.68■□□□□ 0.26
CDH13P55290 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH13P55290 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH13P55290 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH13P55290 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH13P55290 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH13P55290 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH13P55290 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH13P55290 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH13P55290 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDH13P55290 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH13P55290 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH13P55290 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CDH13P55290 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDH13P55290 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 AC097637.2-201ENST00000624096 1997 ntBASIC16.68■□□□□ 0.26
CDH13P55290 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH13P55290 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CDH13P55290 AC004817.3-201ENST00000602957 2129 ntBASIC16.67■□□□□ 0.26
CDH13P55290 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDH13P55290 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH13P55290 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CDH13P55290 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDH13P55290 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 SPDYE21P-201ENST00000413323 827 ntBASIC16.67■□□□□ 0.26
CDH13P55290 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDH13P55290 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH13P55290 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH13P55290 AC104819.1-201ENST00000504587 486 ntBASIC16.67■□□□□ 0.26
CDH13P55290 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.67■□□□□ 0.26
CDH13P55290 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH13P55290 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.67■□□□□ 0.26
CDH13P55290 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH13P55290 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDH13P55290 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 AP000550.4-202ENST00000639755 178 ntBASIC16.67■□□□□ 0.26
CDH13P55290 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CDH13P55290 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH13P55290 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CDH13P55290 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 LINC02199-201ENST00000506655 2702 ntBASIC16.67■□□□□ 0.26
CDH13P55290 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms