Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MIR661-201ENST00000384842 89 ntBASIC17.83■□□□□ 0.44
CLCN4P51793 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN4P51793 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCN4P51793 SPDYE7P-202ENST00000420373 878 ntBASIC17.83■□□□□ 0.44
CLCN4P51793 TSPY16P-201ENST00000449843 468 ntBASIC17.83■□□□□ 0.44
CLCN4P51793 UGT1A2P-201ENST00000454886 866 ntBASIC17.83■□□□□ 0.44
CLCN4P51793 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.83■□□□□ 0.44
CLCN4P51793 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CLCN4P51793 RN7SL204P-201ENST00000582831 262 ntBASIC17.83■□□□□ 0.44
CLCN4P51793 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN4P51793 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCN4P51793 AF228730.6-201ENST00000641497 218 ntBASIC17.83■□□□□ 0.44
CLCN4P51793 AC084121.3-201ENST00000641716 218 ntBASIC17.83■□□□□ 0.44
CLCN4P51793 AC105233.6-201ENST00000642093 218 ntBASIC17.83■□□□□ 0.44
CLCN4P51793 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN4P51793 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN4P51793 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN4P51793 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN4P51793 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CLCN4P51793 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN4P51793 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN4P51793 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN4P51793 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN4P51793 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCN4P51793 AC015922.1-201ENST00000421102 1152 ntBASIC17.82■□□□□ 0.44
CLCN4P51793 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.82■□□□□ 0.44
CLCN4P51793 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN4P51793 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.82■□□□□ 0.44
CLCN4P51793 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN4P51793 SLC25A39P2-201ENST00000537614 270 ntBASIC17.82■□□□□ 0.44
CLCN4P51793 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCN4P51793 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.82■□□□□ 0.44
CLCN4P51793 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCN4P51793 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.82■□□□□ 0.44
CLCN4P51793 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN4P51793 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLCN4P51793 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN4P51793 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN4P51793 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN4P51793 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CLCN4P51793 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLCN4P51793 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLCN4P51793 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN4P51793 AC133963.1-201ENST00000504166 1679 ntBASIC17.81■□□□□ 0.44
CLCN4P51793 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCN4P51793 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 RNU1-129P-201ENST00000384064 167 ntBASIC17.81■□□□□ 0.44
CLCN4P51793 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.81■□□□□ 0.44
CLCN4P51793 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.81■□□□□ 0.44
CLCN4P51793 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLCN4P51793 TERF1P3-201ENST00000505638 1227 ntBASIC17.81■□□□□ 0.44
CLCN4P51793 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN4P51793 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.81■□□□□ 0.44
CLCN4P51793 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.81■□□□□ 0.44
CLCN4P51793 AC087641.1-201ENST00000557561 1021 ntBASIC17.81■□□□□ 0.44
CLCN4P51793 U1.21-201ENST00000580816 167 ntBASIC17.81■□□□□ 0.44
CLCN4P51793 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.81■□□□□ 0.44
CLCN4P51793 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.81■□□□□ 0.44
CLCN4P51793 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.81■□□□□ 0.44
CLCN4P51793 AL158211.3-201ENST00000607385 239 ntBASIC17.81■□□□□ 0.44
CLCN4P51793 AC008267.7-201ENST00000624570 1194 ntBASIC17.81■□□□□ 0.44
CLCN4P51793 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLCN4P51793 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLCN4P51793 AC090340.1-201ENST00000620778 4980 ntBASIC17.81■□□□□ 0.44
CLCN4P51793 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLCN4P51793 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLCN4P51793 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLCN4P51793 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN4P51793 SLC22A20-204ENST00000530038 1673 ntBASIC17.8■□□□□ 0.44
CLCN4P51793 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN4P51793 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN4P51793 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCN4P51793 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLCN4P51793 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLCN4P51793 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN4P51793 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN4P51793 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms