Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
CDK7P50613 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK7P50613 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDK7P50613 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK7P50613 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK7P50613 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK7P50613 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDK7P50613 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK7P50613 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.73■□□□□ 0.59
CDK7P50613 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK7P50613 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK7P50613 MEIS3P1-201ENST00000495167 958 ntBASIC18.73■□□□□ 0.59
CDK7P50613 SERBP1P5-201ENST00000510079 1181 ntBASIC18.73■□□□□ 0.59
CDK7P50613 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.73■□□□□ 0.59
CDK7P50613 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK7P50613 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK7P50613 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK7P50613 SPDYE22P-201ENST00000582158 798 ntBASIC18.73■□□□□ 0.59
CDK7P50613 AC027307.2-201ENST00000591252 911 ntBASIC18.73■□□□□ 0.59
CDK7P50613 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK7P50613 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CDK7P50613 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK7P50613 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDK7P50613 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK7P50613 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK7P50613 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK7P50613 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK7P50613 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK7P50613 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CDK7P50613 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDK7P50613 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDK7P50613 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK7P50613 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK7P50613 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDK7P50613 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDK7P50613 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK7P50613 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDK7P50613 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDK7P50613 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 AC241585.1-201ENST00000433527 519 ntBASIC18.72■□□□□ 0.59
CDK7P50613 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK7P50613 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK7P50613 AL358472.5-202ENST00000641448 1267 ntBASIC18.72■□□□□ 0.59
CDK7P50613 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.72■□□□□ 0.59
CDK7P50613 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CDK7P50613 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CDK7P50613 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK7P50613 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDK7P50613 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK7P50613 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDK7P50613 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDK7P50613 AL353732.1-201ENST00000569618 1459 ntBASIC18.71■□□□□ 0.59
CDK7P50613 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDK7P50613 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CDK7P50613 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK7P50613 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK7P50613 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK7P50613 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK7P50613 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK7P50613 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK7P50613 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDK7P50613 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.71■□□□□ 0.59
CDK7P50613 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK7P50613 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK7P50613 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK7P50613 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDK7P50613 MIR4453-201ENST00000584019 89 ntBASIC18.71■□□□□ 0.59
CDK7P50613 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK7P50613 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDK7P50613 AC025048.6-201ENST00000634326 1161 ntBASIC18.71■□□□□ 0.59
CDK7P50613 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK7P50613 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK7P50613 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK7P50613 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDK7P50613 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.71■□□□□ 0.59
CDK7P50613 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.71■□□□□ 0.59
CDK7P50613 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CDK7P50613 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK7P50613 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK7P50613 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK7P50613 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDK7P50613 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms