Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A9P48067 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A9P48067 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A9P48067 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A9P48067 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC6A9P48067 LINC02012-201ENST00000608206 1725 ntBASIC15.12■□□□□ 0.01
SLC6A9P48067 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A9P48067 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A9P48067 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SLC6A9P48067 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC6A9P48067 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A9P48067 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 AC132938.5-201ENST00000624980 1813 ntBASIC15.11■□□□□ 0.01
SLC6A9P48067 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SLC6A9P48067 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A9P48067 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SLC6A9P48067 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A9P48067 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A9P48067 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC6A9P48067 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC6A9P48067 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.11■□□□□ 0.01
SLC6A9P48067 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A9P48067 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A9P48067 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A9P48067 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A9P48067 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.11■□□□□ 0.01
SLC6A9P48067 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC6A9P48067 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 INTS4P1-201ENST00000438455 1935 ntBASIC15.11■□□□□ 0.01
SLC6A9P48067 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 AC011270.2-201ENST00000624293 2550 ntBASIC15.11■□□□□ 0.01
SLC6A9P48067 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.11■□□□□ 0.01
SLC6A9P48067 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A9P48067 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SLC6A9P48067 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SLC6A9P48067 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC6A9P48067 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A9P48067 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 AL135999.2-201ENST00000622438 1686 ntBASIC15.1■□□□□ 0.01
SLC6A9P48067 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC6A9P48067 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A9P48067 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A9P48067 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A9P48067 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A9P48067 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 POM121L3P-201ENST00000419331 1163 ntBASIC15.1■□□□□ 0.01
SLC6A9P48067 AL450487.1-201ENST00000426799 995 ntBASIC15.1■□□□□ 0.01
SLC6A9P48067 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A9P48067 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.1■□□□□ 0.01
SLC6A9P48067 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A9P48067 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 AC138894.3-201ENST00000603787 634 ntBASIC15.1■□□□□ 0.01
SLC6A9P48067 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.1■□□□□ 0.01
SLC6A9P48067 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A9P48067 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A9P48067 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A9P48067 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A9P48067 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A9P48067 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A9P48067 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A9P48067 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A9P48067 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms