Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.62■□□□□ 0.57
USP8P40818 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.62■□□□□ 0.57
USP8P40818 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
USP8P40818 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 AC063926.3-201ENST00000624734 5658 ntBASIC18.62■□□□□ 0.57
USP8P40818 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
USP8P40818 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
USP8P40818 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.61■□□□□ 0.57
USP8P40818 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
USP8P40818 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.61■□□□□ 0.57
USP8P40818 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
USP8P40818 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
USP8P40818 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.61■□□□□ 0.57
USP8P40818 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.61■□□□□ 0.57
USP8P40818 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.61■□□□□ 0.57
USP8P40818 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.61■□□□□ 0.57
USP8P40818 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.61■□□□□ 0.57
USP8P40818 MIR3652-201ENST00000579335 131 ntBASIC18.61■□□□□ 0.57
USP8P40818 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.61■□□□□ 0.57
USP8P40818 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.61■□□□□ 0.57
USP8P40818 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP8P40818 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
USP8P40818 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.61■□□□□ 0.57
USP8P40818 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP8P40818 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
USP8P40818 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.6■□□□□ 0.57
USP8P40818 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.6■□□□□ 0.57
USP8P40818 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.6■□□□□ 0.57
USP8P40818 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.6■□□□□ 0.57
USP8P40818 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.6■□□□□ 0.57
USP8P40818 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
USP8P40818 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.6■□□□□ 0.57
USP8P40818 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.6■□□□□ 0.57
USP8P40818 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.6■□□□□ 0.57
USP8P40818 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.6■□□□□ 0.57
USP8P40818 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
USP8P40818 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
USP8P40818 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.6■□□□□ 0.57
USP8P40818 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP8P40818 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.6■□□□□ 0.57
USP8P40818 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.6■□□□□ 0.57
USP8P40818 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP8P40818 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
USP8P40818 PMPCAP1-201ENST00000508114 1576 ntBASIC18.59■□□□□ 0.57
USP8P40818 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.59■□□□□ 0.57
USP8P40818 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.59■□□□□ 0.57
USP8P40818 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP8P40818 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP8P40818 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP8P40818 AC092053.1-201ENST00000605787 1936 ntBASIC18.59■□□□□ 0.57
USP8P40818 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.59■□□□□ 0.57
USP8P40818 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
USP8P40818 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP8P40818 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms