Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 AC148477.5-201ENST00000625164 1645 ntBASIC15.86■□□□□ 0.13
TNFRSF1BP20333 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 AC246785.2-201ENST00000432512 513 ntBASIC15.85■□□□□ 0.13
TNFRSF1BP20333 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 AL162727.3-201ENST00000635661 2787 ntBASIC15.85■□□□□ 0.13
TNFRSF1BP20333 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFRSF1BP20333 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 TP73-AS1-210ENST00000637775 1455 ntBASIC15.84■□□□□ 0.13
TNFRSF1BP20333 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 LINC01238-205ENST00000567549 1107 ntBASIC15.84■□□□□ 0.13
TNFRSF1BP20333 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 AC016734.2-201ENST00000624325 1377 ntBASIC15.84■□□□□ 0.13
TNFRSF1BP20333 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFRSF1BP20333 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFRSF1BP20333 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFRSF1BP20333 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms