Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD58P19256 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.3■□□□□ 0.52
CD58P19256 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD58P19256 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD58P19256 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CD58P19256 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.29■□□□□ 0.52
CD58P19256 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.29■□□□□ 0.52
CD58P19256 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.29■□□□□ 0.52
CD58P19256 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CD58P19256 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CD58P19256 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.29■□□□□ 0.52
CD58P19256 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
CD58P19256 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.29■□□□□ 0.52
CD58P19256 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.29■□□□□ 0.52
CD58P19256 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.29■□□□□ 0.52
CD58P19256 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CD58P19256 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CD58P19256 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
CD58P19256 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD58P19256 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CD58P19256 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CD58P19256 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CD58P19256 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.28■□□□□ 0.52
CD58P19256 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.28■□□□□ 0.52
CD58P19256 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.28■□□□□ 0.52
CD58P19256 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.28■□□□□ 0.52
CD58P19256 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.28■□□□□ 0.52
CD58P19256 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 NKILA-202ENST00000614771 2598 ntBASIC18.28■□□□□ 0.52
CD58P19256 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.28■□□□□ 0.52
CD58P19256 AP002414.1-201ENST00000391405 1147 ntBASIC18.28■□□□□ 0.52
CD58P19256 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.28■□□□□ 0.52
CD58P19256 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.28■□□□□ 0.52
CD58P19256 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.28■□□□□ 0.52
CD58P19256 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CD58P19256 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.28■□□□□ 0.52
CD58P19256 AC011676.5-201ENST00000624864 2660 ntBASIC18.28■□□□□ 0.52
CD58P19256 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD58P19256 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.28■□□□□ 0.52
CD58P19256 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.27■□□□□ 0.52
CD58P19256 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.27■□□□□ 0.52
CD58P19256 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CD58P19256 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.27■□□□□ 0.52
CD58P19256 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.27■□□□□ 0.52
CD58P19256 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD58P19256 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD58P19256 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD58P19256 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD58P19256 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD58P19256 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD58P19256 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD58P19256 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
CD58P19256 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CD58P19256 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms