Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
ERCC2P18074 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ERCC2P18074 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ERCC2P18074 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.52■□□□□ 0.39
ERCC2P18074 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.52■□□□□ 0.39
ERCC2P18074 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ERCC2P18074 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ERCC2P18074 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ERCC2P18074 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.52■□□□□ 0.39
ERCC2P18074 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.52■□□□□ 0.39
ERCC2P18074 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.51■□□□□ 0.39
ERCC2P18074 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
ERCC2P18074 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ERCC2P18074 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 SLC25A6P2-201ENST00000497974 877 ntBASIC17.51■□□□□ 0.39
ERCC2P18074 AC093909.1-201ENST00000504731 1122 ntBASIC17.51■□□□□ 0.39
ERCC2P18074 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 GGTLC5P-201ENST00000617623 998 ntBASIC17.51■□□□□ 0.39
ERCC2P18074 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.51■□□□□ 0.39
ERCC2P18074 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.51■□□□□ 0.39
ERCC2P18074 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 AC002310.6-201ENST00000624451 1377 ntBASIC17.51■□□□□ 0.39
ERCC2P18074 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ERCC2P18074 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC2P18074 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
ERCC2P18074 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC2P18074 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 AGGF1P2-201ENST00000426656 2106 ntBASIC17.5■□□□□ 0.39
ERCC2P18074 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
ERCC2P18074 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 KRT8P49-201ENST00000604166 1432 ntBASIC17.5■□□□□ 0.39
ERCC2P18074 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.5■□□□□ 0.39
ERCC2P18074 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC2P18074 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.5■□□□□ 0.39
ERCC2P18074 AC098831.1-202ENST00000438821 336 ntBASIC17.5■□□□□ 0.39
ERCC2P18074 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.5■□□□□ 0.39
ERCC2P18074 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC2P18074 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
ERCC2P18074 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.5■□□□□ 0.39
ERCC2P18074 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ERCC2P18074 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.5■□□□□ 0.39
ERCC2P18074 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.5■□□□□ 0.39
ERCC2P18074 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ERCC2P18074 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC2P18074 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ERCC2P18074 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC2P18074 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ERCC2P18074 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
ERCC2P18074 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC2P18074 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC2P18074 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.49■□□□□ 0.39
ERCC2P18074 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms