Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.98■□□□□ 0.79
TOP1P11387 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.98■□□□□ 0.79
TOP1P11387 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
TOP1P11387 RHOQP3-201ENST00000437982 621 ntBASIC19.98■□□□□ 0.79
TOP1P11387 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.98■□□□□ 0.79
TOP1P11387 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.98■□□□□ 0.79
TOP1P11387 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.98■□□□□ 0.79
TOP1P11387 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.98■□□□□ 0.79
TOP1P11387 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
TOP1P11387 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 AL023806.1-201ENST00000603994 1649 ntBASIC19.98■□□□□ 0.79
TOP1P11387 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TOP1P11387 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 AD000864.1-201ENST00000624076 2295 ntBASIC19.97■□□□□ 0.79
TOP1P11387 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
TOP1P11387 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.97■□□□□ 0.79
TOP1P11387 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.97■□□□□ 0.79
TOP1P11387 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.97■□□□□ 0.79
TOP1P11387 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.97■□□□□ 0.79
TOP1P11387 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.97■□□□□ 0.79
TOP1P11387 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.97■□□□□ 0.79
TOP1P11387 AC004832.2-201ENST00000426397 482 ntBASIC19.97■□□□□ 0.79
TOP1P11387 FAM185BP-201ENST00000443595 716 ntBASIC19.97■□□□□ 0.79
TOP1P11387 CXCL1P1-201ENST00000502804 216 ntBASIC19.97■□□□□ 0.79
TOP1P11387 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.97■□□□□ 0.79
TOP1P11387 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TOP1P11387 AC092865.5-201ENST00000545435 363 ntBASIC19.97■□□□□ 0.79
TOP1P11387 AC002347.1-201ENST00000569543 541 ntBASIC19.97■□□□□ 0.79
TOP1P11387 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.97■□□□□ 0.79
TOP1P11387 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
TOP1P11387 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 AC129492.6-201ENST00000611383 1305 ntBASIC19.97■□□□□ 0.79
TOP1P11387 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.97■□□□□ 0.79
TOP1P11387 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP1P11387 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.96■□□□□ 0.79
TOP1P11387 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.96■□□□□ 0.79
TOP1P11387 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.96■□□□□ 0.79
TOP1P11387 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TOP1P11387 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TOP1P11387 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 KRT18P13-201ENST00000400056 1290 ntBASIC19.96■□□□□ 0.79
TOP1P11387 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.96■□□□□ 0.79
TOP1P11387 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.96■□□□□ 0.79
TOP1P11387 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.96■□□□□ 0.79
TOP1P11387 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.96■□□□□ 0.79
TOP1P11387 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TOP1P11387 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.96■□□□□ 0.79
TOP1P11387 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.96■□□□□ 0.79
TOP1P11387 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.96■□□□□ 0.79
TOP1P11387 AC092865.6-201ENST00000642101 219 ntBASIC19.96■□□□□ 0.79
TOP1P11387 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TOP1P11387 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.96■□□□□ 0.79
TOP1P11387 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TOP1P11387 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP1P11387 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.95■□□□□ 0.78
TOP1P11387 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TOP1P11387 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms