Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EPB41P11171 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.7■□□□□ 0.58
EPB41P11171 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
EPB41P11171 AL590787.1-201ENST00000568856 1315 ntBASIC18.7■□□□□ 0.58
EPB41P11171 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EPB41P11171 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPB41P11171 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPB41P11171 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPB41P11171 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
EPB41P11171 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.7■□□□□ 0.58
EPB41P11171 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EPB41P11171 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EPB41P11171 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
EPB41P11171 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EPB41P11171 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EPB41P11171 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.69■□□□□ 0.58
EPB41P11171 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
EPB41P11171 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EPB41P11171 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
EPB41P11171 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.69■□□□□ 0.58
EPB41P11171 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
EPB41P11171 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.69■□□□□ 0.58
EPB41P11171 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
EPB41P11171 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.69■□□□□ 0.58
EPB41P11171 AL139424.1-201ENST00000607572 797 ntBASIC18.69■□□□□ 0.58
EPB41P11171 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EPB41P11171 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EPB41P11171 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.69■□□□□ 0.58
EPB41P11171 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPB41P11171 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EPB41P11171 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
EPB41P11171 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
EPB41P11171 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EPB41P11171 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EPB41P11171 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.68■□□□□ 0.58
EPB41P11171 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.68■□□□□ 0.58
EPB41P11171 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.68■□□□□ 0.58
EPB41P11171 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.68■□□□□ 0.58
EPB41P11171 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.68■□□□□ 0.58
EPB41P11171 MTDHP4-201ENST00000600287 670 ntBASIC18.68■□□□□ 0.58
EPB41P11171 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 TUBB8P12-201ENST00000308911 1335 ntBASIC18.68■□□□□ 0.58
EPB41P11171 TUBB7P-202ENST00000428444 1305 ntBASIC18.68■□□□□ 0.58
EPB41P11171 TUBB8P7-204ENST00000567960 1332 ntBASIC18.68■□□□□ 0.58
EPB41P11171 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.68■□□□□ 0.58
EPB41P11171 PCDHB19P-201ENST00000570871 2371 ntBASIC18.68■□□□□ 0.58
EPB41P11171 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
EPB41P11171 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPB41P11171 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
EPB41P11171 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
EPB41P11171 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EPB41P11171 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.67■□□□□ 0.58
EPB41P11171 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.67■□□□□ 0.58
EPB41P11171 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EPB41P11171 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
EPB41P11171 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.67■□□□□ 0.58
EPB41P11171 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.67■□□□□ 0.58
EPB41P11171 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPB41P11171 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms