Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 AC104109.2-201ENST00000602919 1418 ntBASIC17.1■□□□□ 0.33
MMP2P08253 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 AC006277.1-201ENST00000624348 1610 ntBASIC17.1■□□□□ 0.33
MMP2P08253 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.1■□□□□ 0.33
MMP2P08253 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP2P08253 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP2P08253 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MMP2P08253 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP2P08253 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP2P08253 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP2P08253 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP2P08253 VN2R19P-201ENST00000442399 1052 ntBASIC17.09■□□□□ 0.33
MMP2P08253 HCG4B-203ENST00000450128 991 ntBASIC17.09■□□□□ 0.33
MMP2P08253 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP2P08253 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.09■□□□□ 0.33
MMP2P08253 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP2P08253 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.09■□□□□ 0.33
MMP2P08253 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
MMP2P08253 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP2P08253 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP2P08253 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
MMP2P08253 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MMP2P08253 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
MMP2P08253 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP2P08253 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP2P08253 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP2P08253 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MMP2P08253 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP2P08253 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.33
MMP2P08253 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.08■□□□□ 0.33
MMP2P08253 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP2P08253 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
MMP2P08253 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP2P08253 SNX33P1-201ENST00000592116 1762 ntBASIC17.08■□□□□ 0.33
MMP2P08253 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.08■□□□□ 0.32
MMP2P08253 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.08■□□□□ 0.32
MMP2P08253 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP2P08253 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 FAM185BP-201ENST00000443595 716 ntBASIC17.08■□□□□ 0.32
MMP2P08253 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP2P08253 AP002490.2-201ENST00000524791 560 ntBASIC17.08■□□□□ 0.32
MMP2P08253 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP2P08253 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.08■□□□□ 0.32
MMP2P08253 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MMP2P08253 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.08■□□□□ 0.32
MMP2P08253 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.08■□□□□ 0.32
MMP2P08253 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 AC092171.3-201ENST00000610122 2651 ntBASIC17.08■□□□□ 0.32
MMP2P08253 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP2P08253 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.08■□□□□ 0.32
MMP2P08253 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
MMP2P08253 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP2P08253 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MMP2P08253 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MMP2P08253 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MMP2P08253 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms