Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SPDYE11-202ENST00000450699 704 ntBASIC17.17■□□□□ 0.34
RETP07949 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.17■□□□□ 0.34
RETP07949 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 CR383656.12-201ENST00000549567 513 ntBASIC17.17■□□□□ 0.34
RETP07949 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.17■□□□□ 0.34
RETP07949 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.17■□□□□ 0.34
RETP07949 SPDYE9P-201ENST00000570642 692 ntBASIC17.17■□□□□ 0.34
RETP07949 AC027307.3-201ENST00000594262 1100 ntBASIC17.17■□□□□ 0.34
RETP07949 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.17■□□□□ 0.34
RETP07949 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.17■□□□□ 0.34
RETP07949 SPDYE10P-202ENST00000612005 668 ntBASIC17.17■□□□□ 0.34
RETP07949 SPDYE8P-202ENST00000612377 668 ntBASIC17.17■□□□□ 0.34
RETP07949 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.17■□□□□ 0.34
RETP07949 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RETP07949 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RETP07949 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RETP07949 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RETP07949 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RETP07949 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
RETP07949 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.17■□□□□ 0.34
RETP07949 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.17■□□□□ 0.34
RETP07949 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.17■□□□□ 0.34
RETP07949 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.17■□□□□ 0.34
RETP07949 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RETP07949 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.17■□□□□ 0.34
RETP07949 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RETP07949 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 AC108860.2-201ENST00000562760 2183 ntBASIC17.16■□□□□ 0.34
RETP07949 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RETP07949 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RETP07949 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
RETP07949 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RETP07949 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.16■□□□□ 0.34
RETP07949 AL355306.1-201ENST00000415580 579 ntBASIC17.16■□□□□ 0.34
RETP07949 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.16■□□□□ 0.34
RETP07949 AC107890.1-201ENST00000422478 521 ntBASIC17.16■□□□□ 0.34
RETP07949 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.16■□□□□ 0.34
RETP07949 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RETP07949 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.16■□□□□ 0.34
RETP07949 AL513480.1-201ENST00000451731 511 ntBASIC17.16■□□□□ 0.34
RETP07949 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.16■□□□□ 0.34
RETP07949 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.16■□□□□ 0.34
RETP07949 AP001059.3-201ENST00000619053 235 ntBASIC17.16■□□□□ 0.34
RETP07949 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RETP07949 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RETP07949 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.16■□□□□ 0.34
RETP07949 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 KRT18P55-202ENST00000578578 1546 ntBASIC17.16■□□□□ 0.34
RETP07949 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RETP07949 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RETP07949 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RETP07949 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.15■□□□□ 0.34
RETP07949 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RETP07949 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.15■□□□□ 0.34
RETP07949 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.15■□□□□ 0.34
RETP07949 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RETP07949 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.15■□□□□ 0.34
RETP07949 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.15■□□□□ 0.34
RETP07949 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.15■□□□□ 0.34
RETP07949 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.15■□□□□ 0.34
RETP07949 AL592309.1-201ENST00000443127 649 ntBASIC17.15■□□□□ 0.34
RETP07949 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.15■□□□□ 0.34
RETP07949 UGT1A2P-201ENST00000454886 866 ntBASIC17.15■□□□□ 0.34
RETP07949 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.15■□□□□ 0.34
RETP07949 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.15■□□□□ 0.34
RETP07949 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.15■□□□□ 0.34
RETP07949 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.15■□□□□ 0.34
RETP07949 STK25P1-201ENST00000585406 838 ntBASIC17.15■□□□□ 0.34
RETP07949 AC019129.2-201ENST00000609837 1235 ntBASIC17.15■□□□□ 0.34
RETP07949 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms