Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.06■□□□□ 0.16
CTSBP07858 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSBP07858 AC012569.1-201ENST00000591191 1524 ntBASIC16.06■□□□□ 0.16
CTSBP07858 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 KRT8P49-201ENST00000604166 1432 ntBASIC16.06■□□□□ 0.16
CTSBP07858 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 MKNK2P1-201ENST00000437526 628 ntBASIC16.06■□□□□ 0.16
CTSBP07858 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSBP07858 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.06■□□□□ 0.16
CTSBP07858 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.06■□□□□ 0.16
CTSBP07858 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.06■□□□□ 0.16
CTSBP07858 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.06■□□□□ 0.16
CTSBP07858 AC005412.3-201ENST00000580309 715 ntBASIC16.06■□□□□ 0.16
CTSBP07858 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.06■□□□□ 0.16
CTSBP07858 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CTSBP07858 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTSBP07858 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.05■□□□□ 0.16
CTSBP07858 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 AL353732.1-201ENST00000569618 1459 ntBASIC16.05■□□□□ 0.16
CTSBP07858 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CTSBP07858 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CTSBP07858 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 AP006288.1-201ENST00000446065 395 ntBASIC16.05■□□□□ 0.16
CTSBP07858 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.05■□□□□ 0.16
CTSBP07858 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CTSBP07858 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CTSBP07858 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.05■□□□□ 0.16
CTSBP07858 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.05■□□□□ 0.16
CTSBP07858 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.05■□□□□ 0.16
CTSBP07858 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.05■□□□□ 0.16
CTSBP07858 AL645728.2-201ENST00000641974 660 ntBASIC16.05■□□□□ 0.16
CTSBP07858 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CTSBP07858 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CTSBP07858 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CTSBP07858 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.05■□□□□ 0.16
CTSBP07858 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CTSBP07858 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CTSBP07858 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTSBP07858 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CTSBP07858 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.04■□□□□ 0.16
CTSBP07858 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.04■□□□□ 0.16
CTSBP07858 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CTSBP07858 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CTSBP07858 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CTSBP07858 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.04■□□□□ 0.16
CTSBP07858 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.04■□□□□ 0.16
CTSBP07858 AC140658.5-201ENST00000438532 169 ntBASIC16.04■□□□□ 0.16
CTSBP07858 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.04■□□□□ 0.16
CTSBP07858 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.04■□□□□ 0.16
CTSBP07858 AC124947.2-201ENST00000547118 1133 ntBASIC16.04■□□□□ 0.16
CTSBP07858 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.04■□□□□ 0.16
CTSBP07858 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.04■□□□□ 0.16
CTSBP07858 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.04■□□□□ 0.16
CTSBP07858 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.04■□□□□ 0.16
CTSBP07858 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.04■□□□□ 0.16
CTSBP07858 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.04■□□□□ 0.16
CTSBP07858 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.04■□□□□ 0.16
CTSBP07858 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTSBP07858 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms