Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHGBP05060 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.38■□□□□ 0.85
CHGBP05060 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.38■□□□□ 0.85
CHGBP05060 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.38■□□□□ 0.85
CHGBP05060 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.38■□□□□ 0.85
CHGBP05060 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CHGBP05060 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 AC010327.4-202ENST00000591484 748 ntBASIC20.38■□□□□ 0.85
CHGBP05060 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.38■□□□□ 0.85
CHGBP05060 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.38■□□□□ 0.85
CHGBP05060 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.38■□□□□ 0.85
CHGBP05060 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.38■□□□□ 0.85
CHGBP05060 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHGBP05060 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.38■□□□□ 0.85
CHGBP05060 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.38■□□□□ 0.85
CHGBP05060 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHGBP05060 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHGBP05060 AC009053.2-201ENST00000563701 2365 ntBASIC20.37■□□□□ 0.85
CHGBP05060 KRT8P49-201ENST00000604166 1432 ntBASIC20.37■□□□□ 0.85
CHGBP05060 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHGBP05060 TOP3BP1-201ENST00000420768 1380 ntBASIC20.37■□□□□ 0.85
CHGBP05060 SNX33P1-201ENST00000592116 1762 ntBASIC20.37■□□□□ 0.85
CHGBP05060 AC129492.6-201ENST00000611383 1305 ntBASIC20.37■□□□□ 0.85
CHGBP05060 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHGBP05060 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHGBP05060 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHGBP05060 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CHGBP05060 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.37■□□□□ 0.85
CHGBP05060 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CHGBP05060 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.37■□□□□ 0.85
CHGBP05060 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.37■□□□□ 0.85
CHGBP05060 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.37■□□□□ 0.85
CHGBP05060 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.37■□□□□ 0.85
CHGBP05060 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.37■□□□□ 0.85
CHGBP05060 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.37■□□□□ 0.85
CHGBP05060 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHGBP05060 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.37■□□□□ 0.85
CHGBP05060 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
CHGBP05060 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.37■□□□□ 0.85
CHGBP05060 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHGBP05060 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.37■□□□□ 0.85
CHGBP05060 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHGBP05060 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHGBP05060 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.37■□□□□ 0.85
CHGBP05060 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHGBP05060 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.37■□□□□ 0.85
CHGBP05060 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHGBP05060 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 AD000864.1-201ENST00000624076 2295 ntBASIC20.36■□□□□ 0.85
CHGBP05060 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CHGBP05060 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 HMGA1P7-201ENST00000406908 502 ntBASIC20.36■□□□□ 0.85
CHGBP05060 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.36■□□□□ 0.85
CHGBP05060 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.36■□□□□ 0.85
CHGBP05060 AC092865.5-201ENST00000545435 363 ntBASIC20.36■□□□□ 0.85
CHGBP05060 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.36■□□□□ 0.85
CHGBP05060 PDPK2P-202ENST00000562415 1191 ntBASIC20.36■□□□□ 0.85
CHGBP05060 AC040169.1-201ENST00000565382 521 ntBASIC20.36■□□□□ 0.85
CHGBP05060 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.36■□□□□ 0.85
CHGBP05060 MPDU1-223ENST00000582151 728 ntBASIC20.36■□□□□ 0.85
CHGBP05060 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHGBP05060 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.36■□□□□ 0.85
CHGBP05060 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHGBP05060 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.36■□□□□ 0.85
CHGBP05060 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.36■□□□□ 0.85
CHGBP05060 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHGBP05060 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHGBP05060 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHGBP05060 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHGBP05060 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHGBP05060 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHGBP05060 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHGBP05060 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHGBP05060 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.35■□□□□ 0.85
CHGBP05060 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms