Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC25.14■■□□□ 1.61
RAPGEF3O95398 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC25.14■■□□□ 1.61
RAPGEF3O95398 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RAPGEF3O95398 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF3O95398 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF3O95398 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF3O95398 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 TPI1-206ENST00000488464 791 ntTSL 5 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 MIR4492-201ENST00000581627 80 ntBASIC25.13■■□□□ 1.61
RAPGEF3O95398 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF3O95398 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF3O95398 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
RAPGEF3O95398 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF3O95398 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF3O95398 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF3O95398 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF3O95398 RPS19-201ENST00000221975 500 ntTSL 3 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF3O95398 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 RNA5SP410-201ENST00000516285 106 ntBASIC25.12■■□□□ 1.61
RAPGEF3O95398 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 FTH1-202ENST00000526640 786 ntTSL 2 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF3O95398 AC020907.1-201ENST00000616460 1350 ntBASIC25.12■■□□□ 1.61
RAPGEF3O95398 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF3O95398 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF3O95398 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RAPGEF3O95398 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
RAPGEF3O95398 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RAPGEF3O95398 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC25.11■■□□□ 1.61
RAPGEF3O95398 HLA-DQB1-201ENST00000374943 1656 ntBASIC25.11■■□□□ 1.61
RAPGEF3O95398 FOS-208ENST00000555686 1496 ntTSL 2 BASIC25.11■■□□□ 1.61
RAPGEF3O95398 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RAPGEF3O95398 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC25.11■■□□□ 1.61
RAPGEF3O95398 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RAPGEF3O95398 TECR-220ENST00000600083 1204 ntTSL 2 BASIC25.11■■□□□ 1.61
RAPGEF3O95398 RPSAP52-203ENST00000622976 1023 ntBASIC25.11■■□□□ 1.61
RAPGEF3O95398 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RAPGEF3O95398 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RAPGEF3O95398 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC25.11■■□□□ 1.61
RAPGEF3O95398 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RAPGEF3O95398 AC093525.8-201ENST00000624099 1342 ntBASIC25.11■■□□□ 1.61
RAPGEF3O95398 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RAPGEF3O95398 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RAPGEF3O95398 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
RAPGEF3O95398 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RAPGEF3O95398 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 AC098859.1-201ENST00000502915 1238 ntBASIC25.1■■□□□ 1.61
RAPGEF3O95398 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 AC244093.1-201ENST00000610837 814 ntBASIC25.1■■□□□ 1.61
RAPGEF3O95398 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RAPGEF3O95398 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RAPGEF3O95398 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RAPGEF3O95398 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC25.1■■□□□ 1.61
RAPGEF3O95398 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RAPGEF3O95398 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
RAPGEF3O95398 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC25.09■■□□□ 1.61
RAPGEF3O95398 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC25.09■■□□□ 1.61
RAPGEF3O95398 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC25.09■■□□□ 1.61
RAPGEF3O95398 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RAPGEF3O95398 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RAPGEF3O95398 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
RAPGEF3O95398 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RAPGEF3O95398 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RAPGEF3O95398 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC25.09■■□□□ 1.61
RAPGEF3O95398 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms