Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH4O75427 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LRCH4O75427 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.71■□□□□ 0.42
LRCH4O75427 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.71■□□□□ 0.42
LRCH4O75427 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 PI4KAP1-204ENST00000612579 1703 ntBASIC17.7■□□□□ 0.42
LRCH4O75427 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH4O75427 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 HLA-A-202ENST00000376806 1854 ntBASIC17.7■□□□□ 0.42
LRCH4O75427 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH4O75427 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
LRCH4O75427 AC079781.3-201ENST00000449110 356 ntBASIC17.7■□□□□ 0.42
LRCH4O75427 FAM197Y8-203ENST00000450145 560 ntBASIC17.7■□□□□ 0.42
LRCH4O75427 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.7■□□□□ 0.42
LRCH4O75427 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH4O75427 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.7■□□□□ 0.42
LRCH4O75427 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.7■□□□□ 0.42
LRCH4O75427 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH4O75427 AF228730.7-201ENST00000641842 219 ntBASIC17.7■□□□□ 0.42
LRCH4O75427 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH4O75427 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH4O75427 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH4O75427 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRCH4O75427 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRCH4O75427 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH4O75427 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH4O75427 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH4O75427 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
LRCH4O75427 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH4O75427 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH4O75427 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCH4O75427 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 AC002310.6-201ENST00000624451 1377 ntBASIC17.69■□□□□ 0.42
LRCH4O75427 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCH4O75427 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH4O75427 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.69■□□□□ 0.42
LRCH4O75427 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LRCH4O75427 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH4O75427 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH4O75427 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH4O75427 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.69■□□□□ 0.42
LRCH4O75427 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
LRCH4O75427 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH4O75427 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH4O75427 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRCH4O75427 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH4O75427 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH4O75427 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.68■□□□□ 0.42
LRCH4O75427 TOP3BP1-201ENST00000420768 1380 ntBASIC17.68■□□□□ 0.42
LRCH4O75427 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH4O75427 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.68■□□□□ 0.42
LRCH4O75427 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH4O75427 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.68■□□□□ 0.42
LRCH4O75427 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH4O75427 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LRCH4O75427 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH4O75427 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH4O75427 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH4O75427 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.68■□□□□ 0.42
LRCH4O75427 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH4O75427 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.68■□□□□ 0.42
LRCH4O75427 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH4O75427 AL450487.1-201ENST00000426799 995 ntBASIC17.68■□□□□ 0.42
LRCH4O75427 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.68■□□□□ 0.42
LRCH4O75427 KRT18P67-201ENST00000432816 1264 ntBASIC17.68■□□□□ 0.42
LRCH4O75427 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.68■□□□□ 0.42
LRCH4O75427 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.68■□□□□ 0.42
LRCH4O75427 SLC25A6P2-201ENST00000497974 877 ntBASIC17.68■□□□□ 0.42
LRCH4O75427 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRCH4O75427 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
LRCH4O75427 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
LRCH4O75427 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LRCH4O75427 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms