Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ACTN4O43707 AP002490.2-201ENST00000524791 560 ntBASIC19.1■□□□□ 0.65
ACTN4O43707 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.1■□□□□ 0.65
ACTN4O43707 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ACTN4O43707 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.1■□□□□ 0.65
ACTN4O43707 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 AL356309.3-201ENST00000624132 1934 ntBASIC19.1■□□□□ 0.65
ACTN4O43707 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.1■□□□□ 0.65
ACTN4O43707 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
ACTN4O43707 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 NCF1C-201ENST00000438382 1427 ntBASIC19.09■□□□□ 0.65
ACTN4O43707 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.09■□□□□ 0.65
ACTN4O43707 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
ACTN4O43707 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.09■□□□□ 0.65
ACTN4O43707 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.09■□□□□ 0.65
ACTN4O43707 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.09■□□□□ 0.65
ACTN4O43707 HCG4P8-203ENST00000443049 980 ntBASIC19.09■□□□□ 0.65
ACTN4O43707 KRT18P31-201ENST00000506277 1292 ntBASIC19.09■□□□□ 0.65
ACTN4O43707 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.09■□□□□ 0.65
ACTN4O43707 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 MIR3652-201ENST00000579335 131 ntBASIC19.09■□□□□ 0.65
ACTN4O43707 MTDHP3-201ENST00000594186 672 ntBASIC19.09■□□□□ 0.65
ACTN4O43707 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.09■□□□□ 0.65
ACTN4O43707 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.09■□□□□ 0.65
ACTN4O43707 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.09■□□□□ 0.65
ACTN4O43707 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACTN4O43707 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.09■□□□□ 0.65
ACTN4O43707 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACTN4O43707 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.08■□□□□ 0.65
ACTN4O43707 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACTN4O43707 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACTN4O43707 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.08■□□□□ 0.65
ACTN4O43707 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACTN4O43707 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.08■□□□□ 0.65
ACTN4O43707 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACTN4O43707 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
ACTN4O43707 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ACTN4O43707 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.08■□□□□ 0.65
ACTN4O43707 TSPY19P-201ENST00000418461 509 ntBASIC19.08■□□□□ 0.64
ACTN4O43707 TSPY18P-201ENST00000441642 509 ntBASIC19.08■□□□□ 0.64
ACTN4O43707 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.08■□□□□ 0.64
ACTN4O43707 FGFR3P6-201ENST00000457012 610 ntBASIC19.08■□□□□ 0.64
ACTN4O43707 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACTN4O43707 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ACTN4O43707 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.08■□□□□ 0.64
ACTN4O43707 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ACTN4O43707 AL139424.1-201ENST00000607572 797 ntBASIC19.08■□□□□ 0.64
ACTN4O43707 AL355877.3-201ENST00000622820 899 ntBASIC19.08■□□□□ 0.64
ACTN4O43707 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACTN4O43707 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ACTN4O43707 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.08■□□□□ 0.64
ACTN4O43707 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ACTN4O43707 AC006449.5-201ENST00000610658 2098 ntBASIC19.08■□□□□ 0.64
ACTN4O43707 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACTN4O43707 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACTN4O43707 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACTN4O43707 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ACTN4O43707 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.08■□□□□ 0.64
ACTN4O43707 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ACTN4O43707 KRT8P49-201ENST00000604166 1432 ntBASIC19.08■□□□□ 0.64
ACTN4O43707 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ACTN4O43707 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ACTN4O43707 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.07■□□□□ 0.64
ACTN4O43707 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.07■□□□□ 0.64
ACTN4O43707 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.07■□□□□ 0.64
ACTN4O43707 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.07■□□□□ 0.64
ACTN4O43707 SART3-203ENST00000546611 1184 ntBASIC19.07■□□□□ 0.64
ACTN4O43707 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.07■□□□□ 0.64
ACTN4O43707 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.07■□□□□ 0.64
ACTN4O43707 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ACTN4O43707 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ACTN4O43707 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms