Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 PRORSD1P-201ENST00000295112 541 ntBASIC12.81□□□□□ -0.36
SNAI2O43623 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SNAI2O43623 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 MIR1238-201ENST00000408483 83 ntBASIC12.81□□□□□ -0.36
SNAI2O43623 GCSHP5-201ENST00000443090 522 ntBASIC12.81□□□□□ -0.36
SNAI2O43623 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.81□□□□□ -0.36
SNAI2O43623 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SNAI2O43623 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 MIR4785-201ENST00000585005 73 ntBASIC12.81□□□□□ -0.36
SNAI2O43623 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.81□□□□□ -0.36
SNAI2O43623 AC093525.9-201ENST00000624961 1746 ntBASIC12.81□□□□□ -0.36
SNAI2O43623 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.81□□□□□ -0.36
SNAI2O43623 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SNAI2O43623 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SNAI2O43623 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.8□□□□□ -0.36
SNAI2O43623 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.8□□□□□ -0.36
SNAI2O43623 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SNAI2O43623 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SNAI2O43623 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.8□□□□□ -0.36
SNAI2O43623 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.8□□□□□ -0.36
SNAI2O43623 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
SNAI2O43623 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.8□□□□□ -0.36
SNAI2O43623 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
SNAI2O43623 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.8□□□□□ -0.36
SNAI2O43623 AC098590.1-201ENST00000468126 897 ntBASIC12.8□□□□□ -0.36
SNAI2O43623 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.8□□□□□ -0.36
SNAI2O43623 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.8□□□□□ -0.36
SNAI2O43623 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.8□□□□□ -0.36
SNAI2O43623 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.8□□□□□ -0.36
SNAI2O43623 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
SNAI2O43623 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.8□□□□□ -0.36
SNAI2O43623 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.8□□□□□ -0.36
SNAI2O43623 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SNAI2O43623 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.8□□□□□ -0.36
SNAI2O43623 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.8□□□□□ -0.36
SNAI2O43623 AC105917.1-201ENST00000506637 2539 ntBASIC12.8□□□□□ -0.36
SNAI2O43623 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SNAI2O43623 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNAI2O43623 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SNAI2O43623 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SNAI2O43623 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.79□□□□□ -0.36
SNAI2O43623 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNAI2O43623 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms