Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
KCNQ3O43525 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
KCNQ3O43525 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.68■■□□□ 1.06
KCNQ3O43525 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
KCNQ3O43525 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
KCNQ3O43525 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.68■■□□□ 1.06
KCNQ3O43525 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.68■■□□□ 1.06
KCNQ3O43525 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.68■■□□□ 1.06
KCNQ3O43525 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.68■■□□□ 1.06
KCNQ3O43525 AC069262.1-201ENST00000539058 672 ntBASIC21.68■■□□□ 1.06
KCNQ3O43525 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.68■■□□□ 1.06
KCNQ3O43525 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.68■■□□□ 1.06
KCNQ3O43525 AL512356.2-201ENST00000546955 174 ntBASIC21.68■■□□□ 1.06
KCNQ3O43525 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.68■■□□□ 1.06
KCNQ3O43525 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.68■■□□□ 1.06
KCNQ3O43525 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
KCNQ3O43525 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
KCNQ3O43525 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
KCNQ3O43525 LINC00895-201ENST00000629028 1637 ntBASIC21.68■■□□□ 1.06
KCNQ3O43525 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
KCNQ3O43525 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
KCNQ3O43525 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.68■■□□□ 1.06
KCNQ3O43525 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
KCNQ3O43525 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
KCNQ3O43525 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.68■■□□□ 1.06
KCNQ3O43525 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNQ3O43525 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNQ3O43525 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
KCNQ3O43525 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
KCNQ3O43525 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 FAM86GP-201ENST00000448322 971 ntBASIC21.67■■□□□ 1.06
KCNQ3O43525 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.67■■□□□ 1.06
KCNQ3O43525 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 AC027307.2-201ENST00000591252 911 ntBASIC21.67■■□□□ 1.06
KCNQ3O43525 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.67■■□□□ 1.06
KCNQ3O43525 AL096865.1-201ENST00000606796 927 ntBASIC21.67■■□□□ 1.06
KCNQ3O43525 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.67■■□□□ 1.06
KCNQ3O43525 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
KCNQ3O43525 AC139713.2-201ENST00000641328 2723 ntBASIC21.67■■□□□ 1.06
KCNQ3O43525 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
KCNQ3O43525 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.67■■□□□ 1.06
KCNQ3O43525 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNQ3O43525 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ3O43525 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.67■■□□□ 1.06
KCNQ3O43525 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KCNQ3O43525 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.66■■□□□ 1.06
KCNQ3O43525 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KCNQ3O43525 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
KCNQ3O43525 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.66■■□□□ 1.06
KCNQ3O43525 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 MIR346-201ENST00000362234 95 ntBASIC21.66■■□□□ 1.06
KCNQ3O43525 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.66■■□□□ 1.06
KCNQ3O43525 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.66■■□□□ 1.06
KCNQ3O43525 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ3O43525 IGHV3-62-201ENST00000520057 340 ntBASIC21.66■■□□□ 1.06
KCNQ3O43525 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.66■■□□□ 1.06
KCNQ3O43525 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ3O43525 AP000842.3-202ENST00000569238 1080 ntBASIC21.66■■□□□ 1.06
KCNQ3O43525 AC092364.2-202ENST00000597012 1073 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms