Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MCCD1P2-201ENST00000423228 335 ntBASIC17.92■□□□□ 0.46
CLDN5O00501 GPX1P2-201ENST00000429271 606 ntBASIC17.92■□□□□ 0.46
CLDN5O00501 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN5O00501 AC124947.2-201ENST00000547118 1133 ntBASIC17.92■□□□□ 0.46
CLDN5O00501 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN5O00501 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN5O00501 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN5O00501 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 AC055717.3-201ENST00000622967 595 ntBASIC17.92■□□□□ 0.46
CLDN5O00501 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN5O00501 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLDN5O00501 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLDN5O00501 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLDN5O00501 SLC22A20-204ENST00000530038 1673 ntBASIC17.91■□□□□ 0.46
CLDN5O00501 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN5O00501 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN5O00501 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN5O00501 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 AC074386.1-202ENST00000463561 864 ntBASIC17.91■□□□□ 0.46
CLDN5O00501 ALG1L5P-201ENST00000482043 771 ntBASIC17.91■□□□□ 0.46
CLDN5O00501 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDN5O00501 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN5O00501 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDN5O00501 MTDHP5-201ENST00000598980 586 ntBASIC17.91■□□□□ 0.46
CLDN5O00501 AL078644.1-201ENST00000609881 752 ntBASIC17.91■□□□□ 0.46
CLDN5O00501 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN5O00501 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLDN5O00501 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLDN5O00501 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN5O00501 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN5O00501 TOP3BP1-201ENST00000420768 1380 ntBASIC17.91■□□□□ 0.46
CLDN5O00501 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN5O00501 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN5O00501 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLDN5O00501 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLDN5O00501 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLDN5O00501 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CLDN5O00501 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLDN5O00501 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLDN5O00501 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 MIR1233-2-201ENST00000408138 82 ntBASIC17.9■□□□□ 0.46
CLDN5O00501 MIR1233-1-201ENST00000408722 82 ntBASIC17.9■□□□□ 0.46
CLDN5O00501 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN5O00501 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
CLDN5O00501 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN5O00501 AC006538.3-201ENST00000612495 578 ntBASIC17.9■□□□□ 0.46
CLDN5O00501 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN5O00501 AC139530.3-201ENST00000620344 690 ntBASIC17.9■□□□□ 0.46
CLDN5O00501 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLDN5O00501 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 AC080080.1-201ENST00000625121 2420 ntBASIC17.9■□□□□ 0.46
CLDN5O00501 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN5O00501 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLDN5O00501 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN5O00501 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLDN5O00501 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN5O00501 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.89■□□□□ 0.46
CLDN5O00501 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.89■□□□□ 0.46
CLDN5O00501 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.89■□□□□ 0.46
CLDN5O00501 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN5O00501 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN5O00501 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN5O00501 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLDN5O00501 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN5O00501 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN5O00501 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN5O00501 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN5O00501 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN5O00501 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN5O00501 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms