Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 ACTG1P4-201ENST00000425123 1122 ntBASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 AC005829.1-201ENST00000570002 483 ntBASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 AP001160.2-201ENST00000596071 487 ntBASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 AL513190.1-201ENST00000621254 727 ntBASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 FER1L4-210ENST00000615531 5998 ntBASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 AC141586.5-201ENST00000624546 2050 ntBASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 AL135999.2-201ENST00000622438 1686 ntBASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA3F8WFD2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA3F8WFD2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA3F8WFD2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.52■□□□□ 0.07
NPIPA3F8WFD2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA3F8WFD2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
NPIPA3F8WFD2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 PP12613-201ENST00000424958 2230 ntBASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 IGLL3P-201ENST00000412472 434 ntBASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 AC004877.2-201ENST00000623941 599 ntBASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA3F8WFD2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA3F8WFD2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms